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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015906215.1_cds_XP_016456433.1_50265
CDS Infomation

[gene=LOC107780410] [db_xref=GeneID:107780410] [protein=protein RETICULATA-RELATED 1, chloroplastic-like] [protein_id=XP_016456433.1] [location=complement(join(37607..37889,38339..38503,38614..38919,39111..39209,40619..40734,40812..40904,41011..41206,42205..42470))] [gbkey=CDS]
Sequence

ATGTCTCATTCAGTATTCCAAACAGCACAAATCATGCCTATCAATACCCAAATCATCCCT
TCTTCTAAACCCCACTTATCTTCGAAACCCTTATTGCCCCCTTCACTCTGCCGCCCTTCT
CTTTTCGCCGGCAAAGTTCGTAAAACCAACGTTGTTATCATCAAGGCTACGGCGTCCCCG
GCTGTCGACGGCGACCCTATGGCCGTCTTGGAACGCTGCTTTCAAGCTTCACCTTCTCTC
GATTCTCCGGCGTCGTCTTCGGTTATCAAATTTGCTAATAACTTGGCCACATCACAGCTT
TCAACTGGCGGAGGAGGTGGAAATATGGGAAAGAATCTAAATCATGGCGGTGGTGATGGA
GGTGACGATGGTGGTGATGATGACGATTACTTCGATGATTTTGATGATGGTGATGAGGGA
GATGAGGGTGGACTCTTTAGGAGACGAATGATACTGCAGGAGTTGTTTGATCGTAAATTT
GTTGATGCCGTGCTGAACGAGTGGCAGAAGACAATGATAGATTTACCAGCTGGACTTCGG
CAAGCCTATGAAATGGGATTAGTCAGCTCTGCCCAAATGGTGAAATTTCTTGCTATTAAT
GCTAGGCCCACCATGGAGAGATCTATTTCTCGGTTACTTCCTCCAGGATTATCCAGGGCA
TTCATTGGCAGGAAGATCGCAGATCCGGCATTTGTATACAAGCTGCTTCTGGAGCAGGCA
ACTACAATTGGTTGCTCAGTGTGGTGGGAGATCAAAAACCGTAAGGAAAGGATTAAACAG
GAGTGGGATCTTGCACTTCTTAACGTTCTAACTGTAACGGCTTGCAATGCTGCTGTTGTT
TGGACGCTTGCTCCTTGTCATTCCTATGGGAATACATTCCGCTTCGATTTGCAGAACACA
TTACAGAAGCTTCCGAACAATATCTTTGAAAAGAGTTATCCTTTAAGAGAATTTGACTTG
CAGAAGAGAATTCATTCTTTTTTCTATAAGGCAGCAGAGTTGTGTATGGTTGGACTCAGT
GCAGGAGCCGTGCAAGGGGGTCTATCAAATCTTCTTGCCAGTAAAAAAGAGGGAAGGTTA
TCAGTGAGTATCCCATCTGTGAGCAGTAATGCACTTGGTTATGGGGCCTTCCTTGGTGTT
TATGCAAACCTGCGTTACCAGCTGTTGAATGGATTTGACAGAGCTGTAATTAGTTACTTT
GATGTTATTGGGGTGGCTCTCTTCTTCAGCACTGCCATGAGAGCCTTGAATGTTCAAGTA
GGAGAGACATCAAGGCTAGCTTGGCTTGGTGTGGAGGTGGATCCATTGGCTCATTCAGAT
GATGTATTGAAGGCGTACAGTCGGCCTACTGAAGGTCTCGAGCAGTCATCGTCAAAGTGG
TTCATATCCAAGAATGCCATTGTTTCCGGGCTCGGGCTTCTTGGTATTAAACAGGGTCAG
AATAACTCAACGACTGAGGGTGAAACACCAGCAGCTCCCAAGGCTCGGAGAAAAAGAGTA
GTCAAGAAAAAGGTAGCAAGTTGA

Peptide Sequence

PEP ID

XP_016456433.1
PEP Infomation

PREDICTED: protein RETICULATA-RELATED 1, chloroplastic-like [Nicotiana tabacum]
Sequence

MSHSVFQTAQIMPINTQIIPSSKPHLSSKPLLPPSLCRPSLFAGKVRKTNVVIIKATASP
AVDGDPMAVLERCFQASPSLDSPASSSVIKFANNLATSQLSTGGGGGNMGKNLNHGGGDG
GDDGGDDDDYFDDFDDGDEGDEGGLFRRRMILQELFDRKFVDAVLNEWQKTMIDLPAGLR
QAYEMGLVSSAQMVKFLAINARPTMERSISRLLPPGLSRAFIGRKIADPAFVYKLLLEQA
TTIGCSVWWEIKNRKERIKQEWDLALLNVLTVTACNAAVVWTLAPCHSYGNTFRFDLQNT
LQKLPNNIFEKSYPLREFDLQKRIHSFFYKAAELCMVGLSAGAVQGGLSNLLASKKEGRL
SVSIPSVSSNALGYGAFLGVYANLRYQLLNGFDRAVISYFDVIGVALFFSTAMRALNVQV
GETSRLAWLGVEVDPLAHSDDVLKAYSRPTEGLEQSSSKWFISKNAIVSGLGLLGIKQGQ
NNSTTEGETPAAPKARRKRVVKKKVAS

Transcript Sequence

Gene sequence data has not been registered.